Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCCTGCTGTAGA
(((((((.(.((((((.....&))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144822
GeneSymbolCD58
Binding site838,854
Score0.923
Seed1
Au0.471
Energy-18.2
Binding len16
Me-7.494
Phylopstem-2.7657019999999997
Phylopflank-0.56299886625
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end3
Position3UTR
2D Structure