Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCTTCAGCTGCAGCTGGAGG
((.((((((((((((.(((.(&).))))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144825
GeneSymbolRUNDC3A
Binding site1094,1115
Score1.0
Seed0
Au0.309
Energy-24.6
Binding len21
Me-5.728
Phylopstem1.9881705
Phylopflank4.023370312499999
Longest consecutive pairings15
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure