Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGAGGCGGAGAACCGGCGGCTTCAGCTGCAGCTGGAGG
(((((((((.((((((..(((&.))).)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144826
GeneSymbolRUNDC3A
Binding site1058,1100
Score0.923
Seed1
Au0.309
Energy-25.0
Binding len22
Me-5.18
Phylopstem3.750347777777778
Phylopflank4.09459976625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure