Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGACTGCGTAAGAGCCAGGTG
(((((((.....((((((.(((&)))))))))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001144827
GeneSymbolRPUSD4
Binding site1182,1203
Score0.923
Seed1
Au0.529
Energy-17.0
Binding len21
Me-14.722
Phylopstem0.17390194285714283
Phylopflank-0.0003926175000000115
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure