Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGTTCACACGGCAGCTGCAGC
((((((((((.(.(((.....&.)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144827
GeneSymbolRPUSD4
Binding site242,265
Score0.923
Seed1
Au0.426
Energy-21.6
Binding len17
Me-8.051
Phylopstem-0.6064487
Phylopflank0.13542668000000005
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure