Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACTCAGCTGCT
..(((((((.((((((.....&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144827
GeneSymbolRPUSD4
Binding site1215,1229
Score0.923
Seed1
Au0.559
Energy-20.0
Binding len14
Me-6.2
Phylopstem-0.31003985714285726
Phylopflank0.060478287499999984
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure