Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCACGGCCGCCGCCGCC
..((.((.((((((((.((((&))))..)))))))).)).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144832
GeneSymbolTTC39A
Binding site6,27
Score0.846
Seed0
Au0.143
Energy-21.9
Binding len21
Me-11.39
Phylopstem0.7690940125000001
Phylopflank0.7279408700000001
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end7
Position5UTR
2D Structure