Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTATGGGCTGCTGCAGCTGGAGG
((.((((((((((.((.....&.)).)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144832
GeneSymbolTTC39A
Binding site740,764
Score1.0
Seed0
Au0.412
Energy-21.4
Binding len18
Me-6.352
Phylopstem1.0718992000000003
Phylopflank0.8112196662500002
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end2
PositionCDS
2D Structure