Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCCGCAGCCCGCTGTCTGCAGA
((((((((((((((...((((&)))))))))))))........))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144871
GeneSymbolVSTM5
Binding site180,207
Score0.846
Seed1
Au0.382
Energy-22.1
Binding len27
Me-4.906
Phylopstem0.24181741818181826
Phylopflank-0.06542746725000002
Longest consecutive pairings13
Position of longest consecutive pairings14
Pairings in 3prime end5
PositionCDS
2D Structure