Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCTTTTCTCGCTGCTGTGGCCGCAGTA
.....(((((((((((((((.&))))))...............))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144871
GeneSymbolVSTM5
Binding site571,602
Score0.846
Seed0
Au0.529
Energy-19.7
Binding len31
Me-13.666
Phylopstem-0.3546218373333333
Phylopflank-0.30066784599999996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure