Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAGCCAGCTATATACCTTCTTAGCAGCGTCTTTTAAGGAGCTGCC
..(((((((((((((.(((((&)))))))))).))..............................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144877
GeneSymbolSCAI
Binding site1114,1164
Score0.846
Seed1
Au0.544
Energy-20.3
Binding len50
Me-5.19
Phylopstem0.9137244181818182
Phylopflank0.8583257950000002
Longest consecutive pairings10
Position of longest consecutive pairings40
Pairings in 3prime end7
PositionCDS
2D Structure