Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCATAGTCAATCCCAGTTGCT
..(((((((.(((((..((((&))))......))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144879
GeneSymbolIMPA1
Binding site831,855
Score0.846
Seed1
Au0.574
Energy-17.9
Binding len24
Me-6.433
Phylopstem0.0028427142857142857
Phylopflank0.053267212499999994
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure