Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATTTACCCTCTTTGGATGGTGCCAGGTG
(((((((((.......(((...&.))).......))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001144881
GeneSymbolPRICKLE1
Binding site2960,2989
Score0.846
Seed1
Au0.456
Energy-17.9
Binding len21
Me-14.466
Phylopstem1.8088344444444446
Phylopflank1.0994253425
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure