Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGACTGCGGCTGTAC
.(((((((((((((((.....&)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144881
GeneSymbolPRICKLE1
Binding site2383,2400
Score0.923
Seed1
Au0.574
Energy-21.4
Binding len17
Me-3.793
Phylopstem5.901120812499999
Phylopflank3.3414944762499994
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure