Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGTTACAGATGGACGTAGCTGCT
..(((((((((..(((((.((&)).)))))......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144881
GeneSymbolPRICKLE1
Binding site3021,3045
Score0.923
Seed1
Au0.456
Energy-21.6
Binding len24
Me-9.593
Phylopstem0.4474475555555555
Phylopflank2.7029037662500004
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure