Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTTGTGGGATGCCTCACGGCTGCTGAGGGGCTGCAGC
((((((((((((((((.((((&.)))).)))))))).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144882
GeneSymbolPRICKLE1
Binding site210,251
Score0.923
Seed1
Au0.412
Energy-26.4
Binding len28
Me-3.938
Phylopstem0.24117309523809516
Phylopflank-0.031226112500000028
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end7
Position5UTR
2D Structure