Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAAGGACAGACTGCGGCTGTAC
.(((((((((((((((..((.&))....)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144882
GeneSymbolPRICKLE1
Binding site2390,2413
Score0.923
Seed1
Au0.574
Energy-22.0
Binding len23
Me-3.793
Phylopstem3.57636725
Phylopflank3.5943415012499993
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure