Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGAATTGTAAGCCGTTTGTTACGCTGCAGTGCTAGATTTGCCAGGG
.(((((((((((.(((((....&.))))).)).))....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001144883
GeneSymbolPRICKLE1
Binding site3468,3515
Score1.0
Seed1
Au0.559
Energy-18.1
Binding len24
Me-5.082
Phylopstem2.8876741875
Phylopflank2.70593095
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure