Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTTTGGATGGTGCCAGGTG
(((((((((.......(((...&))).......))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001144883
GeneSymbolPRICKLE1
Binding site2979,2999
Score0.846
Seed1
Au0.456
Energy-17.7
Binding len20
Me-14.466
Phylopstem1.169725888888889
Phylopflank1.1014781162500002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure