Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTTCTGAGTAGCTGCGAC
(((((((((((((((..((((&)))))))))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144884
GeneSymbolSLC30A7
Binding site1770,1796
Score0.923
Seed1
Au0.441
Energy-23.4
Binding len26
Me-4.171
Phylopstem0.0336354428571428
Phylopflank0.024500381250000036
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure