Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTCCGGAGCTGTG
..((((((.(((..((.....&))..))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144886
GeneSymbolCITED1
Binding site713,728
Score0.846
Seed1
Au0.426
Energy-18.8
Binding len15
Me-8.159
Phylopstem0.5477877
Phylopflank0.6190495577499999
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure