Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTATTCCCAGGAAACCAAACGCCTGAAGCGGACGCCAGTT
.((((((((((((((((((((.&)))..))))))))................))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001366935
GeneSymbolPTAR1
Binding site960,1000
Score0.846
Seed1
Au0.456
Energy-22.9
Binding len40
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end7
PositionCDS
2D Structure