Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGCGGCTGCAC
.((((((((((((........&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144894
GeneSymbolCD209
Binding site2114,2127
Score0.923
Seed1
Au0.309
Energy-21.4
Binding len13
Me-5.619
Phylopstem1.5537971666666668
Phylopflank1.0668282625
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure