Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCAGCTGAAGGCTGCAGT
((((((((.((((((...(((&)))))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144896
GeneSymbolCD209
Binding site263,283
Score0.827
Seed1
Au0.441
Energy-20.4
Binding len20
Me-5.227
Phylopstem-0.778697
Phylopflank-0.18766363749999998
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure