Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGCGGCTGCAC
.((((((((((((........&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144897
GeneSymbolCD209
Binding site2228,2241
Score0.846
Seed1
Au0.309
Energy-21.4
Binding len13
Me-5.619
Phylopstem0.0043383333333333095
Phylopflank0.06861657374999999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure