Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTGACGGCTCCGGCCGTTCTCACTGCGGCTGCAC
.((((((((((((.(...(((&.)))...)..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144899
GeneSymbolCD209
Binding site1739,1776
Score0.962
Seed1
Au0.309
Energy-24.9
Binding len23
Me-4.883
Phylopstem3.655449866666667
Phylopflank2.4710282550000002
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure