Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGCAAAAAGCCCGCAGCCTGCT
..((((((((((((((.((((&)))))))).....))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144911
GeneSymbolCLEC4M
Binding site988,1013
Score0.846
Seed1
Au0.529
Energy-20.3
Binding len25
Me-4.957
Phylopstem-0.34290853000000004
Phylopflank-1.2080891999999999
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end7
Position3UTR
2D Structure