Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGTGACTGCAGCAGCAGC
((((.(((((((((....(((&)))...))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144915
GeneSymbolFGFR2
Binding site164,185
Score0.846
Seed0
Au0.368
Energy-20.7
Binding len21
Me-9.025
Phylopstem1.6104044444444443
Phylopflank1.39980101375
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end4
Position5UTR
2D Structure