Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGACTCTGAAACTGGACCACCCGAAGATAGCAGCCTGGCGC
.(((.((((((((((((((((&))))))))).))........................)))))...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144924
GeneSymbolREXO5
Binding site2203,2251
Score0.846
Seed0
Au0.456
Energy-18.6
Binding len48
Me-7.912
Phylopstem1.0362826565853656
Phylopflank0.7536597500000002
Longest consecutive pairings9
Position of longest consecutive pairings39
Pairings in 3prime end8
PositionCDS
2D Structure