Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACTAACAGCAGCCTGCCTGCAGCTGTC
..((((((((((..((.((((&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144934
GeneSymbolFGF1
Binding site97,128
Score0.846
Seed1
Au0.441
Energy-21.7
Binding len18
Me-7.103
Phylopstem0.25140849999999987
Phylopflank0.06351267649999999
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure