Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTAGAACCGGGTCAGCTTCAGG
(((.((((((((((.((((((&)))))).)))))...))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144935
GeneSymbolFGF1
Binding site3158,3183
Score0.846
Seed0
Au0.529
Energy-20.3
Binding len25
Me-7.705
Phylopstem4.789980230769231
Phylopflank3.9083104250000007
Longest consecutive pairings6
Position of longest consecutive pairings19
Pairings in 3prime end7
Position3UTR
2D Structure