Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCAGCTGGGCTGCGGA
((((((((.(((((((..(((&))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144950
GeneSymbolSSC5D
Binding site326,346
Score0.923
Seed1
Au0.191
Energy-23.5
Binding len20
Me-4.994
Phylopstem1.4563793999999999
Phylopflank0.020836217499999893
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure