Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGCTGGAGCTGGAT
.(.(((((.((((((.((((.&)))))))))).))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144950
GeneSymbolSSC5D
Binding site1889,1908
Score0.923
Seed0
Au0.397
Energy-22.9
Binding len19
Me-6.64
Phylopstem0.9622041333333332
Phylopflank0.7871411532500001
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure