Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGGCAAGGCTGTGCTGGGTATGGCAGCTGCAGCTGA
...(((((((((((((.....&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144951
GeneSymbolGLYCTK
Binding site341,381
Score0.923
Seed0
Au0.412
Energy-24.2
Binding len15
Me-6.515
Phylopstem4.769777692307693
Phylopflank3.279707985000001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure