Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTTTCCCTGCATTGAGGGTCACACAACTTCTTTATATTATGCTGGGTA
((((((((((((((((((....&.)))))))).......................)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001144954
GeneSymbolC5orf47
Binding site1916,1966
Score0.846
Seed1
Au0.603
Energy-20.4
Binding len43
Me-3.938
Phylopstem-0.08968765365853656
Phylopflank0.1321336325
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure