Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCTGCCTCCTCCCAGCTGCGGG
(((((((((.((..(((((((&)))).)))..))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144954
GeneSymbolC5orf47
Binding site352,377
Score0.846
Seed1
Au0.324
Energy-22.1
Binding len25
Me-7.326
Phylopstem-0.24424432222222223
Phylopflank-0.2634402475
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure