Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAAGCCGCAGTATGTC
..((((((((((((...((((&))))..))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144972
GeneSymbolSNX20
Binding site484,504
Score0.981
Seed1
Au0.382
Energy-21.8
Binding len20
Me-5.925
Phylopstem-0.5238305999999999
Phylopflank-0.22096591249999992
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end5
Position3UTR
2D Structure