Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACTAATTTTATATTAGATGCCAGGC
.((((((((..((((((((...&.))))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001144982
GeneSymbolCCDC169
Binding site5195,5224
Score0.846
Seed1
Au0.721
Energy-20.5
Binding len20
Me-7.861
Phylopstem-0.020103499999999996
Phylopflank0.11573423750000003
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure