Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCTGTGTGCACAGGTG
((((((((((((..(((((...&)))))))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001144982
GeneSymbolCCDC169
Binding site4100,4119
Score1.0
Seed1
Au0.603
Energy-19.7
Binding len19
Me-6.084
Phylopstem0.21770023076923076
Phylopflank0.092239175
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure