Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCAAGTCAAGGCTGCAGT
((((((((..((((((.((((&)))).)))).))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144982
GeneSymbolCCDC169
Binding site2640,2663
Score0.846
Seed1
Au0.471
Energy-20.9
Binding len23
Me-6.236
Phylopstem-0.18099112500000003
Phylopflank0.012697762500000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure