Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTATATTAGATGCCAGGC
.((((((((..((((((((...&))))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001144983
GeneSymbolCCDC169
Binding site5201,5220
Score0.846
Seed1
Au0.721
Energy-20.3
Binding len19
Me-7.861
Phylopstem0.18131087500000007
Phylopflank0.08716151249999998
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end5
Position3UTR
2D Structure