Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCTGTGTGCACAGGTG
((((((((((((..(((((...&)))))))))))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001144983
GeneSymbolCCDC169
Binding site4096,4115
Score1.0
Seed1
Au0.603
Energy-19.7
Binding len19
Me-6.084
Phylopstem0.20884746153846154
Phylopflank0.07533586250000002
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure