Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGGCCTCCAGCTGCAT
.((((((((.((((((.....&))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144984
GeneSymbolCCDC169
Binding site1232,1249
Score1.0
Seed1
Au0.618
Energy-19.2
Binding len17
Me-5.036
Phylopstem0.5485206375
Phylopflank-0.05379707875000001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure