Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACAAGTGTGCCAGGA
.((((((((((..(((((....&))))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001144995
GeneSymbolCCDC85C
Binding site11146,11163
Score0.923
Seed1
Au0.515
Energy-21.4
Binding len17
Me-8.429
Phylopstem0.838958938
Phylopflank1.5187556969999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure