Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGTGGGGGTGGGGGGTA
..(((((.((.((((((((((&)))))).)))).)).))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001144995
GeneSymbolCCDC85C
Binding site6178,6199
Score0.846
Seed0
Au0.338
Energy-30.1
Binding len21
Me-10.095
Phylopstem-1.0803623363636363
Phylopflank-0.500280559
Longest consecutive pairings6
Position of longest consecutive pairings15
Pairings in 3prime end8
Position3UTR
2D Structure