Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGCGGCTGCAGCAGCAC
.(((.(((((((((((..(((&))).))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144995
GeneSymbolCCDC85C
Binding site417,437
Score0.846
Seed0
Au0.309
Energy-25.2
Binding len20
Me-7.912
Phylopstem0.30477833272727267
Phylopflank-0.16944422150000005
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure