Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGTCGCTGCGGGTGGAGA
((.((.(((((((((((((((&))))))))...))))))).)).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144995
GeneSymbolCCDC85C
Binding site2690,2715
Score0.923
Seed0
Au0.368
Energy-24.3
Binding len25
Me-7.396
Phylopstem2.074948461111111
Phylopflank1.8062262912499998
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure