Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAACAGCCGACGGCTGA
...(((((((((((((..(((&))).))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144995
GeneSymbolCCDC85C
Binding site2642,2661
Score0.846
Seed0
Au0.309
Energy-23.3
Binding len19
Me-6.515
Phylopstem1.7784089499999998
Phylopflank2.26198753375
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure