Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGAGCAATCTGCAGCTGG
...(((((((((((((..(((&)))...)))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144997
GeneSymbolITGA7
Binding site1684,1705
Score0.923
Seed0
Au0.382
Energy-21.9
Binding len21
Me-6.515
Phylopstem1.2666929285714286
Phylopflank2.648353981249999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure