Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCTGTTTTAGCTGCAGTTGA
...((((((((((((((((((&)))))))......))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001144999
GeneSymbolITGAV
Binding site2285,2310
Score0.846
Seed0
Au0.574
Energy-20.6
Binding len25
Me-6.515
Phylopstem3.2235297333333333
Phylopflank3.27267797625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure